Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKLSPIFSNITGVVRYQDLAYVASVSDEIQEQNIAHSYVTEWDCGTWCVAGEDDDMLPWEIVSATVVHEPVEQALFLGA-RGQVFCMGSGDIHEE-QLPDGDDAIGGRGNMRGVACI-DGVAYACGMD-RQVYRRFDENDWRAIDTGARPPAGSEAVVGFEAIGGFGAREIYAVGWD-GEIWQYDG-KRWQPRESPT-NLILTAICCAEDGSVYACGQA-GTLLRGRN-DHWEIIAQDDVDEDLWSLAWF-DGALYVSSA--TAVYTLVGGH-LKEVDFGDEQPQRCFHL-SAADGVLWSIAAKDIFSFDGQQWTRID |
| 2QC5 Chain:A ((71-298)) | -----------------------------------------------------------------------SLGDIWFTENGANKIGKLSKKGGFTEYPLPQ------PDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNK-------GSYPAFITLGSDNALWFTENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITNDNTIQEYQLQTE-NAEPHGITFGKDGSVWFALKCKIGKLNLN------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QC5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151014 for 1643 contacts (-91.9/contact) +
2D Compatibility (PS) -24024 + (NN) -11942 + (LL) 6140
1D Compatibility (HY) -800 + (ID) 1050
Total energy: -182690.0 ( -111.19 by residue)
QMean score : 0.399
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