Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MHVSKVFPSLRDTLPRDLMASVVVFL-------VALPLCMGIAIASGM-PPAKGLLTGIVG-----GLVVGFLA------GSPLQVSGPAAGLAVL-----------VFELVRTYGVAMLGPILLLAGAIQLLAGRLRLGCWFRVTSPAVVYG-------MLAGIGILIVLSQLHVMLDLAPKASGLDNLLAFP--QAAFAALGSLGMDSGLDAALLGLGTIAVMWGWDKLRPQRLRFLPGALLGVSLATLASLWLALDVRRVEVPANLGEAIVWLRPADLLALAD-----PSLLLAAVVVAFIAS----AETLLSAAAVDRLHDGPRSDMDREL----SAQGVGNMLCGLLGALPMTGVIVRS-------SANVNAGARTRASAIFHGL-------WLLAFVLLLGSLLRQ---IPVASLAGVLVYTG---------VKLVDFKALGNLSRYGRMPMLVYAATAL---AIVFTDLLTGVLVGFALTLLKLVLKAAR--------------LKIALRYTGEHEAELRLSGAAT------FLKVPALSRVLDEVKPGTTLHVPMDNL------SYVDHACMELLEDWGRMAPVQGSRLVIEPRALKRRLEGRLRGSVGLGGARNGGAVSPG-------------------------------------------------- |
| 4M59 Chain:A ((6-714)) | PDAQVLVLAISSHPLPTLAAFLASRRDELLRADITSLLKALELSGHWEWALALLRWAGKEGAADASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVA---PTLVTYNVVLDVYGRMG-RSWPRIVALLDEMRAAGVEPDGFTASTVIAACSRDGLVDEAVAFFEDLKARGHAPSVVTYNALLQVFGKAGNYTEALRVLGEMEQ----NGCQPDAVTYNELAGTEEAARCLDTMASPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVSGKRGMEDYVTRVLEGMRSSGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAFEEARGFLSEVKALEAYIEDA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -306005 for 3797 contacts (-80.6/contact) +
2D Compatibility (PS) -54200 + (NN) -22767 + (LL) 736
1D Compatibility (HY) -15200 + (ID) 4300
Total energy: -401736.0 ( -105.80 by residue)
QMean score : 0.251
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