Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLAIPMPERPRRARGRLQLLAIIGLVVGPMLLASAMYKWNFWVPQGRSYSGALIGNGQTPADLGVQG-----------RSQGEQWQLLVTAPGTCGEDCQQLVYLARQINIALGREASRAGHALAAS-GEL-PADFANL-VRQD----YPRLQRYGLDPALYD-KAGGG------ERPLLWVVDPHGNLVLRYDAKA----NGKKLLKDVQLLLKLSHIG |
3SBC Chain:A ((22-183)) | -----------------------------------------------------VAQVQKQAPTFKKTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEE--QGAQVLFASTDSEYSLLA-WTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAFQWTDKNG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SBC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56827 for 1010 contacts (-56.3/contact) +
2D Compatibility (PS) -14284 + (NN) -8708 + (LL) 4380
1D Compatibility (HY) -400 + (ID) 700
Total energy: -76539.0 ( -75.78 by residue)
QMean score : 0.529
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