Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRVNKTVLVLVALVALVLGLTVHKVLTAQRQADPTVLLDAGIVILPQTRKVPALEFTNQDGQAVSTASLKGRWHLLFFGYTFCPDVCPTTLAQLRELQGKLPQEVRDDLQVVFVSVDPNRDTPQQIKQYLGYFNAGFQGLTGTPENIQKLANAMSIPYIPADTSKPNYTVDHSGNLVIIGPDGEQHGFIRAPLNNAKLEAQLPGVLKPQA
4TXO Chain:B ((24-152))
------------------------------------------------------FQLTDQNGKAVTDKSLKGKPTLIFFGYTHSPDVCPTSLFEISEVLRAMGKDA-DKVNAIFISVDPERDTPATMKNYLSSFDPHLEGLSGDPAEIAKVITSYRVYAKKVPTKDGDYTMDHTALIYLMDRDGRFVSPFNLKRTPEEAAADLKRYL----
General information:
TITO was launched using:
RESULT:
Template:
4TXO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65840 for 949 contacts (-69.4/contact) +
2D Compatibility (PS) -14474 + (NN) -12529 + (LL) 5760
1D Compatibility (HY) -11200 + (ID) 2500
Total energy: -100783.0 ( -106.20 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_4TXO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TXO-query.scw
PDB file :
Tito_Scwrl_4TXO.pdb
: