Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRWEELSEQPCSLARVLAILGDRWTLLVLRDCFLGVRRFDDFERSLGVTRHVLADRLKRLVEAEILAKVPYQERPLREEYRLTEKGMELYPAILSLVNWGDRHLAGVEGPPLEHVHKHCGQHMHGVLVCSECGEPLHARDVTVREGLFWKGRLLRRG
2F2E Chain:A ((5-144))
---TSHKQASCPVARPLDVIGDGWSMLIVRDAFEGLTRFGEFQKSLGLAKNILAARLRNLVEHGVMVA-VPAESGSHQEYRLTDKGRALFPLLVAIRQWGEDYFFAPDESHVRLVERDSGQPVPRLQVRAGDGSPLAAEDTRVSRD-----------
General information:
TITO was launched using:
RESULT:
Template:
2F2E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63189 for 811 contacts (-77.9/contact) +
2D Compatibility (PS) -14133 + (NN) -561 + (LL) 1496
1D Compatibility (HY) -10000 + (ID) 2350
Total energy: -88737.0 ( -109.42 by residue)
QMean score : 0.406
(partial model without unconserved sides chains):
PDB file :
Tito_2F2E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F2E-query.scw
PDB file :
Tito_Scwrl_2F2E.pdb
: