Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQRKA-VLVMGAGDATGGAIARRFAREGYVACVARRNAEKLEPLVQAIRDQGGEALACGCDARQEQQVIDLFARIEGEVGALEAVIFNVGANVWFPITETTERVYRKVWEMAAFGGFLTGREAARVMLPRQRGTIIFTGATASLRGRAHFAAFSGAKFALRALAQSMARELGPKDIHVAHPIIDGAIDTDFIRETLPELYKRKEQDGILDPEHIAETYWQIHCQPRDCWVHELDLRPWMETF
3H7A Chain:D ((5-243))
--PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHA-PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIID------------------------MPPAAVAGAYWQLYQQPKSAWTFEMEIRPY----
General information:
TITO was launched using:
RESULT:
Template:
3H7A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -171257 for 1810 contacts (-94.6/contact) +
2D Compatibility (PS) -22704 + (NN) -8139 + (LL) 2068
1D Compatibility (HY) -18400 + (ID) 5900
Total energy: -224332.0 ( -123.94 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_3H7A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H7A-query.scw
PDB file :
Tito_Scwrl_3H7A.pdb
: