Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVGFEARTQQGAALRPTSHFVYESIYTAILEKRLAPAAKLSKETLGQIFRVSNGTIQRALTRLAEDGAVVMPPKEVASVARPDERQARQVLDARLLVESEVVRQLPAGLDPAALAELRALVDEEQACLAARDSAGLIRLAGRFHLRLAELTENPLLQGFVRGLVARASLDIALNKG-AVYTAEACAAQRALLDALEDGDSAAAAALMDAYLRGLFARMRFLPPPTTDLREAFGMKAPSGEKRRRA
2HS5 Chain:A ((27-233))
--------------TSRTTRVAGILRDAIIDGTFRPGARLSEPDICAALDVSRNTVREAFQILIEDRLVAHELNRGVFVRVPTAEDITELYICRRVVECAGVNGF--DPATGDLSRVAEALDLADERYAVEDWTGVGTADIHFHSALASLNNSNRIDELMRSVWNEARLVFHVMDDAHRFHGPYLTRNHEIYDALAAGNTEAAGQLLKTYLEDAEAQILGAYR----------------------
General information:
TITO was launched using:
RESULT:
Template:
2HS5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102410 for 1555 contacts (-65.9/contact) +
2D Compatibility (PS) -22840 + (NN) -16720 + (LL) 2356
1D Compatibility (HY) -10000 + (ID) 2200
Total energy: -151814.0 ( -97.63 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_2HS5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HS5-query.scw
PDB file :
Tito_Scwrl_2HS5.pdb
: