Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTVVSFRADDALVAALDELARATHRDRPYHLRQALAQYLERQQWQVAAIDEGLADANAGRLLEHIEIEKRWGLQ
2AY0 Chain:A ((3-45))
-TTTMGVMLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLE-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2AY0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5035 for 198 contacts (-25.4/contact) +
2D Compatibility (PS) -5050 + (NN) -5191 + (LL) 2964
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -14462.0 ( -73.04 by residue)
QMean score : 0.384
(partial model without unconserved sides chains):
PDB file :
Tito_2AY0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AY0-query.scw
PDB file :
Tito_Scwrl_2AY0.pdb
: