Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPTRVLRGLVAALPLFLAACSDSAPSSEEIARLLAERGFDKPACASSTLFKTFPVTLSDSFSGPGPAKGNAAVYDALVGVGLLRRDG-------DSYDLTPAGREDYKPESKAFCYSSGFDVSVRSVDPAKPDDYGPAVEKGWLVTVEVKPREVKDWAKNPEVLKQASLTTLQQITQPQVGQVSLVKPRGEEGYKLVNTRFSPRQGFHFNQAW |
3BJ6 Chain:A ((68-111)) | ------------------------------------------------------------------RQYISRILQEVQRAGLIERRTNPEHARSHRYWLTPRGEAIITAIRADEMAKLALFSEGFSSVELTAYHKVQLALTRFFADLAKEA-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BJ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2550 for 180 contacts (-14.2/contact) +
2D Compatibility (PS) -3552 + (NN) 1763 + (LL) 7004
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -135.0 ( -0.75 by residue)
QMean score : 0.329
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