Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLINTQVQPFKVNAFHNGKFIEVTEESLKGKWSVLIFMPAAFTFNCPTEIEDAANNYGEFQKAGAEVYIVTTDTHFSHKVWHETSPAVGKAQFPLIGDPTHQLTNAFGVHIPEEGLALRGTFVINPEGVIKTVEIHSNEIARDVGETVRKLKAAQYTAAHPGEVCPAKWKEGEKTLAPSLDLVGKI
4MA9 Chain:E ((1-186))
-SLINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLAPSLDLVGKI
General information:
TITO was launched using:
RESULT:
Template:
4MA9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111110 for 1391 contacts (-79.9/contact) +
2D Compatibility (PS) -20012 + (NN) -2791 + (LL) 208
1D Compatibility (HY) -17200 + (ID) 5550
Total energy: -156455.0 ( -112.48 by residue)
QMean score : 0.657
(partial model without unconserved sides chains):
PDB file :
Tito_4MA9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MA9-query.scw
PDB file :
Tito_Scwrl_4MA9.pdb
: