Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MALQVASAPHGSSEDSTSASLPANYPYHTRMRRNEYEKAKHDLQIELLKVQSWVKETGQRVVVLFEGRDAAGKGGTIKRFMEHLNPRGARIVALEKPSSQ-------E-QGQ-------------------------------WYF---QRYIQ--------HLPTAGEMVFFDRSWYNR-AGVERVMG---FCSPLQYLEFMRQAPELERMLTNSGILLFKYWFSVSREEQLRRFISRRDDPLKHWKLSPIDIKSLDKWDDYTAAKQAMFFHTDTADAPWTVIKSDDKKRARLNCIRHFLHSLDYPDKDRRIAHEPDPLLVGPASRVIEEDEKVYAEAAAAPGHANLDIPA |
1P6X Chain:A ((4-204)) | --------------------------------------------------------MVTIVRIYLDGVYGIGKSTTGRVMASAASG-GSPTLYFPEPMAYWRTLFETDVISGIYDTQNRKQQGNLAVDDAALITAHYQSRFTTPYLILHDHTCTLFGGNSLQRGTQPDLTLVFDRHPVASTVCFPAARYLLGDMSMCALM---AMVA----TLPREPQGGNIVVTTLNVEEHIRRLRTRARIGEQ---------IDITLIATLRNVYFMLVNTCHFLRSGRVWRDGWGELPTSCGAYKHRATQMDAFQERVSPELGDTLFALFKTQELLDDRGVILEVHAWALDALMLKLRN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P6X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24741 for 943 contacts (-26.2/contact) +
2D Compatibility (PS) -16068 + (NN) -7848 + (LL) 5576
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -47181.0 ( -50.03 by residue)
QMean score : 0.471
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