Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHRRTQSRMSVLRRLAAVLGLGACALAAEAAEPLKIGFVYVGPVGDHGWTYQHELGRRELVEHFGDKVKTSFVENVAEGADAERVIRNLAKDGYGLVFTTSFGYMNPTAKVARQFPKVTFEHATGYKRDRNLGTYLSRSYEGRYVGGFLAAKMTRSHKIGYIASFP-IPEVIRDINAIQLALDKYDPQAELKVMWVSTWFDPGKEADAANALIDQGVDVVFQHTDSPA--PIQAAERRG------VYAVGYASDMQHFGPKTVLTSIVNDWGPHYIRSAQAVMDGTWKSEDFWGGLAESTVVLPLNQEVLPAPVREEAGRLIESIRSGAFHPFTGPIRDQSGKERFAAGVSATKADLASMNYYVEGIKADLPK |
| 2O20 Chain:A ((62-307)) | --------------------------------RTTTVGVILPTI--TSTYFAAITRGVDDIASMY-K-YNMILANSDNDVEKEEKVLETFLSKQVDGIVYMGSSLDEKIRTSLKN-SRTPVVLVGTIDGDKEIPSVNIDYHLAAYQSTKKLIDS-GNKKIAYIMGSLKDVENTERMVGYQEALLEANIEFDENLVFEGNY-SYEQGKALAERLLERGATSAVVSHDTVAVGLLSAMMDKGVKVPEDFEIISGANSPITQYTYPTLTSVNQPLYDLGAVAMRLLTKLMLKEDVEQNQLVLDHEIFSRRSTK---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85908 for 1957 contacts (-43.9/contact) +
2D Compatibility (PS) -25451 + (NN) -3246 + (LL) 7084
1D Compatibility (HY) -1200 + (ID) 1250
Total energy: -109971.0 ( -56.19 by residue)
QMean score : 0.498
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