Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYEWLNALPKAELHLHLEGTLEPELLFALAERNRIALPWNDVETLRKAYAFNNLQEFLDLYYAGADVLRTEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQTHTDRGIPFEVVLAGIRAALRDGEKLLGIRHGLILSFLRHLSEEQAQKTLDQALPFRDAFIAVGLDSSEVGHPPSKFQRVFDRARSEGFLTVAHAGEEGPPEYIWEALDLLKVERIDHGVRAFEDERLMRRLIDEQIPLTVCPLSNTKLCVFDDMSQHTILDMLERGVKVTVNSDDPAYFGGYVTENFHALQQSLGMTEEQARRLAQNSLDARLVK |
3RYS Chain:B ((12-315)) | ------APPVAELHLHIEGTLQPELIFALAERNGIELPYEDIEELREKYEFTDLQSFLDLYYANMAVLQTEQDFTDMTRAYLERAAAGGVRHAEIMMDPQAHTSRGVALETCVNGVANALATSEEDFGVSTLLIAAFLRDMSEDSALEVLDQLLAMHAPIAGIGLDSAEVGNPPSKFERLYQRAAEAGLRRIAHAGEEGPASYITEALDVLHVERIDHGIRCMEDTDVVQRLVAEQVPLTVCPLSNVRLRAVDKLADHPLPEMLAIGLNVCVNSDDPAYFGGYVDDNFEQLVKVLEFSVPEQATLAANSIRSSFAS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RYS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -162794 for 2748 contacts (-59.2/contact) +
2D Compatibility (PS) -33041 + (NN) -15736 + (LL) 656
1D Compatibility (HY) -30800 + (ID) 8150
Total energy: -249865.0 ( -90.93 by residue)
QMean score : 0.500
|
|
|