Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFSTQDSDEVLSEINVTPLVDVMLVLLVVFIVTAPLLTNSIPINLPKTESVAPPEQKDPLVVSIDGAGKLFVNKDEIQPELLESNLAAAKAKDAEVRVQLQADEGVNYGQVAKAMASIERAGITRLAVITAR
2PFU Chain:A ((44-135))
----------------------------------------DVKVNLPASTSTPQPRPEKPVYLSVKADNSMFIGNDPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEE
General information:
TITO was launched using:
RESULT:
Template:
2PFU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23240 for 486 contacts (-47.8/contact) +
2D Compatibility (PS) -9597 + (NN) 2578 + (LL) 3928
1D Compatibility (HY) -8400 + (ID) 1000
Total energy: -35731.0 ( -73.52 by residue)
QMean score : 0.668
(partial model without unconserved sides chains):
PDB file :
Tito_2PFU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PFU-query.scw
PDB file :
Tito_Scwrl_2PFU.pdb
: