Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKPYALLSLLATGTLLAQGAWAEDPEVLFKNKGCVACHAIDTKMVGPAYKDVAAKFAGQAGAEAELAQRIKNGSQGVWGPIPMPPNAVSDDEAQTLAKWVLSQK
3X39 Chain:B ((1-82))
----------------------EDPEVLFKNKGCVACHAIDTKMVGPAYKDVAAKFAGQAGAEAELAQRIKNGSQGVWGPIPMPPNAVSDDEAQTLAKWVLSQK
General information:
TITO was launched using:
RESULT:
Template:
3X39.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11931 for 452 contacts (-26.4/contact) +
2D Compatibility (PS) -9164 + (NN) -8170 + (LL) 2008
1D Compatibility (HY) -9200 + (ID) 4100
Total energy: -40557.0 ( -89.73 by residue)
QMean score : 0.472
(partial model without unconserved sides chains):
PDB file :
Tito_3X39.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3X39-query.scw
PDB file :
Tito_Scwrl_3X39.pdb
: