Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLRFALTPGEPAGIGPDLCLL-LARS---AQPHPLIAIASRTLLQERAGQL-GLAIDLKDVSPAAWPERPAKAGQLYVWDTPLAAPVRP-GQLDRANAAYVLETLTRAGQGCLDGHFAGMITAPVHKGVINEAGIPFSGHTEFLADLTHTAQVVMMLATRGLRVALATTHLPLREVADAISDERLTRVARILHADLRDKFGIAHPRILVCGLNPHAGEGGHLGR-EEIEVIEPCLERLRGEGLDLIGPLPADTLFTPKHLEHCDAVLAMYHDQGLPVLKYKGFGAAVNVTLGLPIIRTSVDHGTALDLAGSGRIDSGSLQVALETAYQMAASRC |
| 4JQP Chain:B ((18-342)) | ----IGITMGDAAGVGAEVVVKSLAHASVYAQCRPLVIGDAKRL--ERANQIVGGEMKIRRIEDAS--EARYEQGTIDCIDLGLIPDDLPFGQLSAIAGDAAYQYIKRAVELAQSGKIDAICTAPLNKEALHAGGHKYPGHTEMLAHLTGVDEVSMMLVAPQLRVIHVTTHIGIIDAIRKIEPGLVQRTIERGNATLV-KAGIERPRIGVCGINPHAGENGLFGYGEEEEKIIPAVTLLQERGLDVTGPLPADTLFFRAGRGDFDLVVAMYHDQGHGPVKVLGLEAGVNVTVGLEVIRTSVDHGTAFDIAGKGVVDEGSMLEALRQGAELATRR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JQP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -234199 for 2808 contacts (-83.4/contact) +
2D Compatibility (PS) -34466 + (NN) -20262 + (LL) 748
1D Compatibility (HY) -19200 + (ID) 6500
Total energy: -313879.0 ( -111.78 by residue)
QMean score : 0.511
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