Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDCLFCKIVAGEVPARKFYEDEEVVAFHDIGPQAPVHFLVIPKRHIPTLEHLTEADRPLAGHILFTAQRLAREQGCEEGFRVVMNCNDLGGQTVHHIHMHVLGQRQMHWPPG
4EQH Chain:B ((18-128))
-DTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG
General information:
TITO was launched using:
RESULT:
Template:
4EQH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94450 for 769 contacts (-122.8/contact) +
2D Compatibility (PS) -12341 + (NN) -9472 + (LL) 208
1D Compatibility (HY) -11200 + (ID) 2750
Total energy: -130005.0 ( -169.06 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_4EQH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EQH-query.scw
PDB file :
Tito_Scwrl_4EQH.pdb
: