Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQFFLRYAYAPLFWSGFIGLATWQVGYRQASHAWLVALFLGALGLSFLAERRLPYQPRWNRPHADRLRDVLHASVNESLNALGILALPLLAGVLGFWPVWPQAWPLWLQLLLAIVLADLGITLVHYASHRSALLWRLHAVHHSVQRLYGFNGLMKHPLHLGLEALGGTL---PLLLLGVPQTVAALLAFAIGIQLLLQHSNVDMRIGGLRHVFAWAPLHRLHHIRYGRAGDVNFALFFSVWDRLLGTALHRPDYRLDSTDMGIGDQPDYPRDYAGQLLAPFRDLPRSRHVPQPP--EGLGRSAGQA---------- |
4PHR Chain:A ((1-277)) | SEFELMKRLSE------IKVLPILESLKYIKHNHASVVRFGDGEIDLMTGHSIPYQD-YNEKLAKRLQQILQTKSDEKL----LVCLPDVFSNMDRYN--QNARHFWERHFLK--YSEFYLNCCDAPFYGSTFISRPY-----------IDLIDKSPSEAYFESLKELWRGKDLLIVEGATSRSG-----VGNDLFVAASSIKRLVCPSKN--AFQYYDEILRLTEKNAKNRLILVMLGPTAKVLVADLTTKGYQ--AIDLG-HIDSEYEWYEMG---ATYKVKLTNKHTAEFNYDEGIELEFSQEYQEQIVARIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182179 for 2170 contacts (-84.0/contact) +
2D Compatibility (PS) -27372 + (NN) -3735 + (LL) 4084
1D Compatibility (HY) -13200 + (ID) 2250
Total energy: -224652.0 ( -103.53 by residue)
QMean score : ?
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