Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLPAVTPGWPAIPPGATLGGFDGQGRRSWATISRAPSGASCSRNRSATRTYGWGATATTPATITGIPSTTAPAT
1OMC Chain:A ((1-27))
-----------------------------------CKSGSSCSTSYNCCRSCNYTKRCY----------------
General information:
TITO was launched using:
RESULT:
Template:
1OMC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1553 for 123 contacts (-12.6/contact) +
2D Compatibility (PS) -2589 + (NN) -1569 + (LL) 1524
1D Compatibility (HY) -1200 + (ID) 300
Total energy: -5687.0 ( -46.24 by residue)
QMean score : 0.362
(partial model without unconserved sides chains):
PDB file :
Tito_1OMC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OMC-query.scw
PDB file :
Tito_Scwrl_1OMC.pdb
: