Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRASFVLLALSCAAPLLSLAEPLRFAGD-DGCPYLCPG-TPQRPGYLVEALSQVLR---EPPHFDSLPWPRAVQMVRDGHRDGLVG-AYGL----DGLRVGSEPIGWVGLAFYTRHDSDWHYSGDASLLGQRLGLAQGYVNNPRFEAWRSQAGDDDLHLQVLGGERVLPRNLQKLLLGRIDVLLEDRDIIEHY-LEHHPQLAGQIRRAGEL-----PGRQPLHVGLSPHLPEVDARLAELDEGLRQLRREGTLKVLGERYRLSFE |
| 1LST Chain:A ((2-233)) | -------------------LPQTVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFS-DKLYAADSRLIAAKGSPI-QPTLESLKGKHVGVLQGSTQEAYANDNWRTKG-----VDVVA-YANQDLIYSDLTAGRLDAALQDEVAASEGFLKQ-PAG-KEYAFAGPSVKDKKYFGDGTGVGLRKD---DTELKAAFDKALTELRQDGTYDKMAKKYFDFNV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LST.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90677 for 1737 contacts (-52.2/contact) +
2D Compatibility (PS) -23218 + (NN) -12020 + (LL) 2260
1D Compatibility (HY) -2400 + (ID) 1800
Total energy: -127855.0 ( -73.61 by residue)
QMean score : 0.412
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