Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIQHRTQDAIRTLTAAFAPFDCLIQATRKGNFSFTIVDQHGVACHSERLYPEQYDDSGKMEEVINRVRKKTLAA
2LJK Chain:A ((46-99))
-----------SAVKEQYPGIEIESRLGGTGAFEIEI---NGQLVFSKL-ENGGFPYEKDLIEAIRRASNGETLE
General information:
TITO was launched using:
RESULT:
Template:
2LJK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13432 for 262 contacts (-51.3/contact) +
2D Compatibility (PS) -5455 + (NN) 1063 + (LL) 1504
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -18720.0 ( -71.45 by residue)
QMean score : 0.281
(partial model without unconserved sides chains):
PDB file :
Tito_2LJK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LJK-query.scw
PDB file :
Tito_Scwrl_2LJK.pdb
: