Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGVFRTRFTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAE-YRAAIIEAGIRVVETAGNDPGEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIHPAVKAAIRAADERSTDLIMRSLRNTARVARNAISQEVLAIEARGGAGYADIAALVSGQRG----RQVYQQGDTDLGIWSAGMVQGLIDDEPACAELLRDIVEQARQLVRQRLEGMLAGV |
2Z6J Chain:B ((1-313)) | ---MKTRITELLKIDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPK-EVVKANIDKIKSLTDKPFGVNIMLLS-----PFVEDIVDLVIEEGVKVVTTGAGNPSKYMERFHEAGIIVIPVVPSVALAKRMEKIGADAVIAEGMEAGGHIGK--LTTMTLVRQVATAISIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKESNAHPNYKEKILKARDIDTTISAQ----AVRAIKNQLTRD-FELAEKDAF----------EQMGAGALAKAVVHGDVDGGSVMAGQIAGLVSKEETAEEILKDLYYGAAKKIQEEASRWTGVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z6J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179033 for 2692 contacts (-66.5/contact) +
2D Compatibility (PS) -32520 + (NN) -17658 + (LL) 1404
1D Compatibility (HY) -20400 + (ID) 5100
Total energy: -253307.0 ( -94.10 by residue)
QMean score : 0.535
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