Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLRNGVPSMTKDEKEKTHVDAIIERYKDLMVEIPPADRQP-------------GLSLLWPVPAQPAIDKGVRQAENWLADQIEGQLWTAF------AFGRDSLPTPMQKTAFEVAFLTRLQQRLVAARRSG
2JX0 Chain:A ((640-770))
-LDGDPDPGLPSTEDVILKTEQVTKNIQELLRAAQEFKHDSFVPCSEKIHLAVTEMASLFPKRPALEPVRSSLRLLNASAYRLQSECRKTVPPEPGAPVDFQLLTQQVIQCAYDIAKAAKQLVTITTREKKQ
General information:
TITO was launched using:
RESULT:
Template:
2JX0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14910 for 713 contacts (-20.9/contact) +
2D Compatibility (PS) -12178 + (NN) -6886 + (LL) 208
1D Compatibility (HY) 0 + (ID) 500
Total energy: -34266.0 ( -48.06 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_2JX0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JX0-query.scw
PDB file :
Tito_Scwrl_2JX0.pdb
: