Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVFSQVSMSHPINLCLAELDRAAIGRLWAPVDAFYMDHLEELIVLDLPGWRDSAGIRREMEFFEAGGQ----RVSLWSEVEHEFR
2NX2 Chain:A ((118-170))
---------------------------------------------------------------QFKQKNQFFIDKSDGLLLL-YDP-EKEGSPKYMLGTAEKRREQDGYPIYFITMDDLRVT
General information:
TITO was launched using:
RESULT:
Template:
2NX2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15458 for 266 contacts (-58.1/contact) +
2D Compatibility (PS) -5265 + (NN) -602 + (LL) 5912
1D Compatibility (HY) -2400 + (ID) 250
Total energy: -18063.0 ( -67.91 by residue)
QMean score : 0.330
(partial model without unconserved sides chains):
PDB file :
Tito_2NX2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NX2-query.scw
PDB file :
Tito_Scwrl_2NX2.pdb
: