Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLAQFTPSALADLANCVLRIPLALQQPSSVAMTLPSLTSFMPHFGAPALLLLQLLAALPATAAETDATPLRFSVMESWSMPLVRLQRGQPIDGIVYDITRSLARQVGRKALYH-PYPRGRIEQAMNAGEIDVRCYISPAWLSHDFPGYRWSVALLVQRDILVAREGFA---PIPE---ALPAQRIGTVLGYSYPR-LQA-LFDIGRLRRDDARTQDLVLEKLRAGRYRYAVSHQLSLHWSNRQAPGQPPLQEAAQL--EETAVSCMVRDSAEVPVEAILKTFEEMKRSGEIEEILQRYR
2Q88 Chain:A ((8-239))--------------------------------------------------------------ELKEQGFARIAI--ANEPPFTAVGADGKVSGAAPDVAREIFKRLGVADVVASISEYGAMIPGLQAGRHDAIT-AGLFMKPERCAAVAYSQPILCDAEAFALKKGNPLGLKSYKDIADNPDAKIGAPGGGTEEKLALEAGVP--RDRVIVVPDGQSGLKMLQDGRIDVYSLPVLSINDLVSKANDPNVEVLAPVEGAPVYCDGAAFRKGDEALRDAFDVELAKLKESGEFAKIIEPYG


General information:
TITO was launched using:
RESULT:

Template: 2Q88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106992 for 1814 contacts (-59.0/contact) +
2D Compatibility (PS) -23103 + (NN) -3425 + (LL) 5852
1D Compatibility (HY) 800 + (ID) 1800
Total energy: -128668.0 ( -70.93 by residue)
QMean score : 0.335

(partial model without unconserved sides chains):
PDB file : Tito_2Q88.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Q88-query.scw
PDB file : Tito_Scwrl_2Q88.pdb: