Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------------------------------MLAELFAVMAPVLFGAGVGYVWVRLGHAYP-----TEFVSRIVFNIGSPCLILATL----AHTRVDLHSFGRMALASALICVCMAALGWAAARLGRQEWQVLV----PAYSFP----NVGNMGLPVCLYAFGEAGMTL---AVAFYLIMSIGNFSLGVFWMSGERSWRSLLGNPILLSVLLALLLMGLDLQLPRWMANTVDLMAGLTIPLMLITLGVSLASIRPRQLGNGFFYGGLRLLLGALVGWSVALALQLPPLAQGVLVVQSSMPVAVFNYLYALRGNRSPDQVASLVLCSTLLSFAFIPLLLTWWLPALR------------------------- |
2XEP Chain:A ((7-434)) | SVPTPAEAALAAQTALAADDSPMGDAARWAMGLLTRPEDVAARFIPTFNFAETVREWRSKGPFTVRAYHPVAHKGWVVLSAPAGVRYILSLTLDSSGLIRILTLKPETVIPDMVTWNDVEETLHTPGVQHSVYAVRLTPDGHEVLHASAPERPMPTGSAYKLYLMRALVAEIEK-GTVGWDEILTLTPELRSLPTGDMQDLPDGTRVTVRETAHKMIALSDNTGADLVADRLGREVVERSLAAAGHHDPSLM-RPFLTSHEVFELGWGDPERRAEWVRQDEAGRRELLEKMAGVMTVRGSDLGATVHQLGIDWHMDAFDVVRVLEGLLQDSGRDTSGTVEEILTAYPGLLIDEERWRRVYFKAGSSPGVMMFCWLLQDHAGISYVLVLRQSADEQRLIGDGLFLRGIGAKIIEAEAKLLSS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XEP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -299908 for 2250 contacts (-133.3/contact) +
2D Compatibility (PS) -30689 + (NN) -2420 + (LL) 4
1D Compatibility (HY) 6000 + (ID) 1700
Total energy: -328713.0 ( -146.09 by residue)
QMean score : 0.122
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