Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRTVEDVDMLNHHFRVCSATVYRPPGDGCQSATSQPSAWWMAAKESRSGQLRRVEHVAFEGHPAAVLAGRAVEDRAVVGEADGQAEADVGSVLRGVQLAFEVQLEHARLDAFQADGDVRVVHGLAFAAALLGADGEGHGVSVHVLLQLAWGRRRQRGGQTT-------GRRAGWPVLA-AVGAARGLGII-RRRRSPTAHHQPTPEGMMKLPVLAVLGAALLLSACAKKEAEACASPDVKDQLMRIFLQGAITERSPE-FKDSALRDVAILEKDPDSGVLSCVGTLSVPAGQQVVEGV---LQYRIAPVAKSDYD----YLLLDTAGANTTALAQRLNKALGQ |
| 3SYA Chain:A ((6-333)) | IQRYV---------RKDGKCNVHHGNVRETYRYLTDIFTTLVDLKWRFNLLIFVMVYTVTWLFFGMIWWLIAYIRGDMDHIEDPSWTPCVTNL-NGFVSAFLFSIETETTIGYGYRVITDKCPEGIILLLIQSVLGSIVNAFMVGCMFVKISQPKKRAETLVFSTHAVISMRDGKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTSEG----EFIPLNQTDINVGYYTGDDRLFLVSP--LIISHEINQQSPFWEISKAQLPKEELEIVVILEGMVEATGMTCQARSSYITSEILWGYRFTPVLTLEDGFYEVDYNSFHETYETSTPSLSAKELAELANRAESN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SYA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26004 for 1992 contacts (-13.1/contact) +
2D Compatibility (PS) -32328 + (NN) -2737 + (LL) 1484
1D Compatibility (HY) -7600 + (ID) 2200
Total energy: -69385.0 ( -34.83 by residue)
QMean score : 0.022
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