Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRDRLYTWAGLWRSPSSSWEALRLEDDQAESQLRAPDERSGLPYQLDYRLRWDADWHLREAVFHVESETGVRKLHLLADGRGHWQDGDGEALPAFDGCLDIDIWPSPFTNTFPIRRLGLADGQRAEIRALYIEAPALEPRSMRQAYTRLDASHYLYENLEGS----AFKAVLLVDEQGLVIDYPGLFQRL |
2C1D Chain:B ((1-137)) | ----------------------------CETAPKEVVYVEGAVEASLTGA---PGNPEEGVRIMTTNALGNCVACHQIGALPD--VEFPGTIAPPLDGAGDR--------------------WTEAQLRGIVANAKMTFEGTFMPAFYKVDGFVRPGDGFSGKAGAEPLAPILNAQQIEDVVAFLVTLKE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21527 for 987 contacts (-21.8/contact) +
2D Compatibility (PS) -13366 + (NN) -1970 + (LL) 3324
1D Compatibility (HY) -800 + (ID) 750
Total energy: -35089.0 ( -35.55 by residue)
QMean score : 0.086
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