Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEINIYQNPGQSLANIYKGFARQCNPGFVFPEAQTIEAWDIPLRLHPEFIPGGDISKADQQYSTLLAQEIANGVTIGFRMVNEKERVCNVEILPLLTSMAQNLDRIKARFGSGYLDRFKGSPNVYPTDVGFSTDASGGISQESGLLVSYGVNLRTLTPGTWQAMTLPEDIKALVGPGVGLRLDAPNFSDVFNTIKSGLRYTTAVTLLLAYFAAI
2IGS Chain:G ((6-217))
---INIYQNPGQSLANIYKGFARQCNPGFVFPEAQTIEAWDIPLRLHPEFIPGGDISKADQQYSTLLAQEIANGVTIGFRMVNEKERVCNVEILPLLTSMAQNLDRIKARFGSGYLDRFKGSPNVYPTDVGFSTDASGGISQESGLLVSYGVNLRTLTPGTWQAMTLPEDIKALVGPGVGLRLDAPNFSDVFNTIKSGLRYTTAVTLLLAYFAAI
General information:
TITO was launched using:
RESULT:
Template:
2IGS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132676 for 1669 contacts (-79.5/contact) +
2D Compatibility (PS) -22512 + (NN) -10014 + (LL) 456
1D Compatibility (HY) -30400 + (ID) 10600
Total energy: -205746.0 ( -123.28 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_2IGS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IGS-query.scw
PDB file :
Tito_Scwrl_2IGS.pdb
: