Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPVAHRLLFSLTALLAATAQAAVDGQKLYTQGGANPAAAACVTCHGADGMGLAAAGFPRLAGLPAAYLSKQLHDLKQGGS--------REHPVMKGIADALGDDEIQALANTLAAMPAPKPVELSRVATPRSPGETLAVRGAWERNIPECVTCHGPAGSGVGEA-FPPLQGQGEMYLSNQLRAWQLGTRRNDPNDL-MGHIAKSLSEEEIRSVSQFFATLGQAGGQP |
1M70 Chain:D ((12-189)) | --------------------------------------AVCGACHGVDGNS-PAPNFPKLAGQGERYLLKQLQDIKAGSTPGAPEGVGRKVLEMTGMLDPLSDQDLEDIAAYFSSQKG--SVGYADPALAKQ-GEKLFRGGKLDQGMPACTGCHAPNGVGNDLAGFPKLGGQHAAYTAKQLTDFREGNRTNDGDTMIMRGVAAKLSNKDIEALSSYIQGL------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1M70.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -37565 for 1275 contacts (-29.5/contact) +
2D Compatibility (PS) -18136 + (NN) -8242 + (LL) 2744
1D Compatibility (HY) -9200 + (ID) 3050
Total energy: -73449.0 ( -57.61 by residue)
QMean score : 0.379
|
|
|