Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVKISQTADVQRFFEEASGQLNERGDPRTKALVRRILDDTAKLIEEMQVTPDEFWKAVDYLNRLGSRQEAGLLAAGLGLEHYLDLLLDAQDAEAGLTGGTPRTIEGPLYVAGAPLSDGEARMDDGRDA-GTVMFLQGRVSGPDGQPLAGAIVDVWHANTQGTYSYFDSS--QSEYNLRRRIRTDADGRYRARSIVPSGYGCPSDGPTQELLDRLGRHGQRPAHIHFFVSAPGHRHLTTQINLAGDRYLWDDFAYATRDGLIGDLRFNDDPAAARDRGVEGGRFAELDFDFQLQASPAPAAERRSQRPRALQG |
| 1DMH Chain:B ((3-308)) | --VKIFNTQDVQDFLRVASGLEQEGGNPRVKQIIHRVLSDLYKAIEDLNITSDEYWAGVAYLNQLGANQEAGLLSPGLGFDHYLDMRMDAEDAALGIENATPRTIEGPLYVAGAPESVGYARMDDGSDPNGHTLILHGTIFDADGKPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYGCPPEGPTQQLLNQLGRHGNRPAHIHYFVSADGHRKLTTQINVAGDPYTYDDFAYATREGLVVDAVEHTDPEAIKANDVE-GPFAEMVFDLKLTRLVDGVDNQVVDRPR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DMH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41104 for 2241 contacts (-18.3/contact) +
2D Compatibility (PS) -33159 + (NN) -19525 + (LL) 356
1D Compatibility (HY) -24800 + (ID) 8550
Total energy: -126782.0 ( -56.57 by residue)
QMean score : 0.553
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