Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MTLTSIGPANRMARSAETHPLTWRLREDAQP---VWLEEY---QSKDGYAAARKALTQMAQDDIVQTVKDSGLKGRGGAGFPTGVKWGLMPKDESLNIRYLLCNADEMEPNTWKDRMLMEQLPHLLVEGMLISARALKAYRGYIFLRGEYVDAARNLNRAIDEAKAAGLLGKNILGSGFDFELFVHTG--AGRYICGEETALINSLEGRRANPRSKPPFPAAVGVWGKPTCVNNVETLCNVPAIVGNGVDWYKTLARPGSEDMGTKLMGFSGKVKNPGLWELPFGVSARELFEDYAGGMRDGFQLKAWQPGGAGTGFLLPEHLDAQMFAGGIAKVGTRMGTGLAMAVDDSINMVSLLRNMEEFFARESCGWCTPCRDGLPWSVKLLRALERGEGQPGDLETLEQLVNFLGPGKTFCAHAPGAVEPLGSALKYFRAEFEAGISRQPSAAPRPATVGA |
| 4N5H Chain:X ((1-315)) | MADEEAMLAKVQASWAQTAARDKARYADERVPEDVHWETEYRYEQSADPQQTLNLYYPAKRRNATMPTVIDI----HGG---------GWFYGDRNLNRNYCRYLASQ----------------GYAVMGM-----------GYRLLPD--VDLRGQIQDIFASLRWLSHFGPQR---GFDLDHVLLTGDSAGGHLASLVACIQQSAELQELFGVSRVNFNFTLVALVCP--VAEPSKLPEAAGDMSDMAAFYLDKLSGGDQALVDHL-NFSQVVKGLDL--PPFMLI---------GGQNDSF-------------YLQSQALLKVFDANHV-----------------------------------------------TYTTKLWPASAGPH-----LKHVFNVQHW---------EWPESIETNLEMLRTFDALSKQQDQAEENE--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38949 for 2601 contacts (-15.0/contact) +
2D Compatibility (PS) -33139 + (NN) -12202 + (LL) 7488
1D Compatibility (HY) -8400 + (ID) 3400
Total energy: -88602.0 ( -34.06 by residue)
QMean score : 0.346
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