Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLKPQTLMVAIQCVAARTRELDAQLQNDDPQNAAELEQLLVGYDLAADDLKNAYEQALGQYSGL---PPYDRLIEEPAS
2JQ3 Chain:A ((1-79))
SEAEDASLLSFMQGYMKHATKTAKDALSSVQESQVAQQARGWVTD-GFSSLKDYWSTVKDKFSEFWDLDPEVRPTSAVAA
General information:
TITO was launched using:
RESULT:
Template:
2JQ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -658 for 312 contacts (-2.1/contact) +
2D Compatibility (PS) -8410 + (NN) -9888 + (LL) 176
1D Compatibility (HY) 2000 + (ID) 450
Total energy: -17230.0 ( -55.22 by residue)
QMean score : 0.388
(partial model without unconserved sides chains):
PDB file :
Tito_2JQ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JQ3-query.scw
PDB file :
Tito_Scwrl_2JQ3.pdb
: