Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----MTLSEPVRRCPRNGKRIAREPGDRPGTFRLIHPRWAGASVKRAVRACSSCVLLCHAHANPEGTHHVQQHPGARQLHHLPVEATEPGHRRRPARRAAGLFRRFLAHRRGTQRRPRYPAQLRLPLPLSREGTRMIKRIAQTAGFAGLLAALLLTLLQILWVTPLILEAETYEKSEPVAAQPHEHAPGVAAHVHDEEAWEPEDGWQRTLSTTGGNLVVAVGFALMLAGLFTLRAP-GQTWQGLLW--GLAGYAVFCLAPSLGLPPELPGTAAADLVQRQYWWIATAAATAVGLALLVFGGNWPLKLVGAVLLALPHLFGAPQPEVHASLAPEALAQRFVVASLVSNALFWAALGLAAAWLFRRNRGGVDA |
2P4B Chain:A ((3-293)) | ASGALLQQMNLASQSLNYELSFISINKQGVESLRYRHARLDNRPLAQLLQMDGP-----RREVVQRGNEISYFEPGLEPFTLNGDYIVDS-LPSLIYTDFKRLSPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDTESKL-----PMRVDLLDRDGETLEQFRVIAFNVNQDISSSMQTLAKANLPPLKAKFSWTPTW--------------LPQGFSEVSSSRRPLPTMDNMPIESRLYSDGLFSFSVNVNRATPSSTDQMLRTGRRTVSTSVR-------------------DNAEITIVGEL--------------------PPQTAKRIAENIKFGA------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P4B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32703 for 2053 contacts (-15.9/contact) +
2D Compatibility (PS) -28157 + (NN) 5924 + (LL) 7168
1D Compatibility (HY) -2400 + (ID) 1500
Total energy: -51668.0 ( -25.17 by residue)
QMean score : 0.006
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