Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPMAADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALESFVQGDLRPDLTLVFDLPVEIGLARAAARGRLDRFEQEDRRFFEAVRQTYLQRAAQAPERYQVLDAGLPLAEVQAGLDRLLPNLLERLNG
3UWK Chain:B ((23-228))
--GLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPMAADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALESFVQGDLRPDLTLVFDLPVEIG----------DRFEQEDRRFFEAVRQTYLQRAAQAPERYQVLDAGLPLAEVQAGLDRLLPNLLERL--
General information:
TITO was launched using:
RESULT:
Template:
3UWK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88101 for 1567 contacts (-56.2/contact) +
2D Compatibility (PS) -22341 + (NN) -17647 + (LL) 1064
1D Compatibility (HY) -25200 + (ID) 9800
Total energy: -162025.0 ( -103.40 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_3UWK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UWK-query.scw
PDB file :
Tito_Scwrl_3UWK.pdb
: