Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------MRRLKRDPLER-AFLRGYQNGITGKSRDLCPFTHPTTRQSWLNGWREGRGDNWDGLTGTAGLQRLNQLQHV-------
3C0F Chain:B ((3-87))
IMDEIVNLQKEVSLEEAERYANIASYGDGILLSVHDSTGYRAPEVYCCGEKPWEVYACNR------GANLISVNQFEFYFRIEVEG
General information:
TITO was launched using:
RESULT:
Template:
3C0F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 17473 for 375 contacts (46.6/contact) +
2D Compatibility (PS) -6532 + (NN) 958 + (LL) -36
1D Compatibility (HY) -1200 + (ID) 650
Total energy: 10013.0 ( 26.70 by residue)
QMean score : -0.085
(partial model without unconserved sides chains):
PDB file :
Tito_3C0F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C0F-query.scw
PDB file :
Tito_Scwrl_3C0F.pdb
: