Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAHKDFTLAPRASGSVSWVETLVISALALGLGWWFSPDDPLQVNATFPWVILAPLLLGMRYGFVRGLASAALLVAALFAFRARGVEAYAQVPAAFIVGVLLCAMLVGEFRDIWERRLERLELANEYRQLRLDEFTRAHHILRISHDRLEQRVAGNDQSLRSSLLGLRQLLRELPG-DEAPLDALAETVLALLAQYGSLRIAGLYRVRYDRTPEPQPLATL-------G---------EMPALDADDLLVRTCLERGELVSVRQELLER---G----EQRAHSALQVCVPLVDTDGRILALLAVEQMPF-FVFNERTFSLLAILAGHIADLLQSDRRALQLADIDAQRFSQYLKRSLLDARDHGLPACLYAFELTDARYGEEVQRLLEGSQRGLDVQLRLRNDEGRRVLLVLLPLTSAEGSQGYLQRLRILFAERFGQARELESLGVRIRQYELDAGNDRQALGHFLFNECGLNDQQVAI |
| 3DBA Chain:A ((7-172)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------NILFELLTEIQDEAGSME-KIVHKTLQRLSQLLAADRCSMFICRSRN-GIPEVATRLLNVTPTSKFEDNLVNPDKETVFPLDIGIAGWVAHTKKFFNIPDVKKNNHFSDYLDKKTGYTTVNMMAIPITQ-GKEVLAVVMALNKLNASEFSKEDEEVFKKYLNFISLVLR--------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DBA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128253 for 1001 contacts (-128.1/contact) +
2D Compatibility (PS) -15155 + (NN) -6149 + (LL) 25480
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -128127.0 ( -128.00 by residue)
QMean score : 0.489
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