Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRFTEEQILDFLKQAEAGVPVKELCRRHSFSDATFYT
3KKC Chain:A ((32-51))
-------------------KITVQDVIGLANVGRSTFYS
General information:
TITO was launched using:
RESULT:
Template:
3KKC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6413 for 85 contacts (-75.4/contact) +
2D Compatibility (PS) -2194 + (NN) -1390 + (LL) 2136
1D Compatibility (HY) -2800 + (ID) 200
Total energy: -10861.0 ( -127.78 by residue)
QMean score : 0.705
(partial model without unconserved sides chains):
PDB file :
Tito_3KKC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KKC-query.scw
PDB file :
Tito_Scwrl_3KKC.pdb
: