Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVLVIESSARQRGSVSRLLTAEFISHWKIAHPADRFQVRDLAREPLPHLDELLLGAWTTPCDGH-SAAERRALERSNRLTEELRMADVLVLAAPMYNFAIPSSLKSWFDHVLRAGLTFRYAEQGPEGLLQGKRAFVLTARGGIYAGGGLDHQEPYLRQVLGFVGIHDVTFIHAEGMNMGPEFREKGLARARERMRQALETDTSLCVPLPTLR
2Z9D Chain:B ((1-191))
-SKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALR-PSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAK---------------------
General information:
TITO was launched using:
RESULT:
Template:
2Z9D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114368 for 1430 contacts (-80.0/contact) +
2D Compatibility (PS) -20909 + (NN) -10423 + (LL) 1964
1D Compatibility (HY) -17200 + (ID) 4650
Total energy: -165586.0 ( -115.79 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_2Z9D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z9D-query.scw
PDB file :
Tito_Scwrl_2Z9D.pdb
: