Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQTDKHYFGTLLAQTSRAWRAELDRRLSHLGLSQARWLVLLHLARHRDSPTQRELAQSVGVEGPTLARLLDGLESQGLVRRLAVAEDRRAKHIVLTPKADVLIADIEAIAASVRNDVLTGIDESEQALCQQVLLRILANLENR
3DEU Chain:B ((27-157))
--------LGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISR----------RIKLTEKAEPLIAEMEEVIHKTRGEILAGISSEEIEL----LIKLIAKLEH-
General information:
TITO was launched using:
RESULT:
Template:
3DEU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80295 for 736 contacts (-109.1/contact) +
2D Compatibility (PS) -13688 + (NN) -10087 + (LL) 2328
1D Compatibility (HY) -10800 + (ID) 2450
Total energy: -114992.0 ( -156.24 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_3DEU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DEU-query.scw
PDB file :
Tito_Scwrl_3DEU.pdb
: