Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIPHDLLEADTLNNLLEDFVTREGTDNGDETPLDVRVERARHALRRGEAVILFDPESQQCQLMLRSEVPAELLRD
1Y0N Chain:A ((3-78))
MLIPHDLLEADTLNNLLEDFVTRE------T-PLDVRVERARHALRRGEAVILFDPESQQCQLMLRSEVPAELLRD
General information:
TITO was launched using:
RESULT:
Template:
1Y0N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50960 for 422 contacts (-120.8/contact) +
2D Compatibility (PS) -7331 + (NN) -5025 + (LL) -472
1D Compatibility (HY) -10000 + (ID) 3400
Total energy: -77188.0 ( -182.91 by residue)
QMean score : 0.812
(partial model without unconserved sides chains):
PDB file :
Tito_1Y0N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y0N-query.scw
PDB file :
Tito_Scwrl_1Y0N.pdb
: