Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIGHGYDVHRFGEGDFITLGGVRIPHKHGLVAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPRFKGADSRALLRHVVAIVAEKGWKVGNVDATIVAQAPKMAPHIETMRGLIAEDLGVAVDQVNVKATTTERLGFTGREEGIAVHAVALLMAR
5B8F Chain:C ((8-164))
MRIGHGYDVHRFGEGDFITLGGVRIPHKHGLVAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPRFKGADSRALLRHVVAIVAEKGWKVGNVDATIVAQAPKMAPHIETMRGLIAEDLGVAVDQVNVKATTTERLGFTGREEGIAVHAVALLMAR
General information:
TITO was launched using:
RESULT:
Template:
5B8F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120654 for 1321 contacts (-91.3/contact) +
2D Compatibility (PS) -17545 + (NN) -12487 + (LL) 0
1D Compatibility (HY) -20400 + (ID) 7850
Total energy: -178936.0 ( -135.45 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_5B8F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5B8F-query.scw
PDB file :
Tito_Scwrl_5B8F.pdb
: