Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MASHELDYRILGESMQTVEIELDPGETVIA-EAGAM-NYMTGDIRFT------ARMGDGSDGSL-LGKLWSAGKRKLGGESVFMTHFT------NEGQGKQHVAFAAP-----Y-PGSVVAVDLDDVGGRLFCQ------KDSFLCAAYGTRVGIA--FTKRLGAGFFGGEGFILQKL----EGDGLVFVHAGGT-LIRRQLNG-------ETLRVDTGCLVAFTDGIDYDVQLAGG------LKSMLFGGEGLLLTTLKGSGTVWLQSLPFSRLAGRIYDATFRAREEVRTNNG----------------------------------------------- |
| 4LR4 Chain:A ((11-370)) | HFNTEDNDTDLTLLQSKIATEEVTCDFRVSNKYMWSASTMEYNFSDQKWTSNTEIFSTYAKTSEGFVMSGFLLNPKGQSNYNSALREGYLNDSAYDENQGHYYQCVVSDEDCNNITFMLESNVNVFIFDNDINLIYRSSDEAGVTSYFDRYYSTTKTIAGTSNKVISLGLIDGNYYIVFKVKDATATTGYHYGYYAGQPLPIAQTTTFSDLTHYTTIKWNRSSSSQSASTQTLTINCPSGSEDEYALTGVKFSDKSKAFANNTYASSIDYYYTPATASYSKKLAQTGGWWSDLVDNNPPSGSIDGNYATSVTVHWVSGISYVNASCTTMTQMTLDYLVPFGIIVG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LR4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48160 for 1450 contacts (-33.2/contact) +
2D Compatibility (PS) -25331 + (NN) 2978 + (LL) 0
1D Compatibility (HY) -4800 + (ID) 2150
Total energy: -77463.0 ( -53.42 by residue)
QMean score : 0.020
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