Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFERVREDIQSVFHRDPAARNALEVLTCYPGLHAVWLHRLAHGLWTSGWKWLARLVSNFGRWMTGIEIHPGARIGRRFFIDHGMGIVIGETAEIGDDVTLYQGVTLGGTTWNKGKRHPTLGNNVVVGAGAKVLGPFTVGEGAKVGSNAVVTKEVPPGATVVGIPGRIIMREDSEQQAKRQAMAEKLGFDAYGVSQDMPDPVARAIGQLLDHLQAVDGRLEGMCQALTALGSDYCAKDLPVLREEDFAGVKDEDGNPAA
4H7O Chain:C ((84-251))
-------DICATVNRDPAVSMYSMPLLYLKGYHALQGYRVANWLWRQGRKALATYFQNQISVACQVDIHPAARIGRGIMLDHATGIVIGETAVVEDDVSILQDVTLGGTGKECGDRHPKIREGVMIGAGAKILGNIEVGEGAKIGSGSVVLQAVPPHTTVAGVPARIVGRPQSDK-----------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4H7O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118543 for 1376 contacts (-86.2/contact) +
2D Compatibility (PS) -18174 + (NN) -11392 + (LL) 5904
1D Compatibility (HY) -12800 + (ID) 4000
Total energy: -159005.0 ( -115.56 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_4H7O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4H7O-query.scw
PDB file :
Tito_Scwrl_4H7O.pdb
: