Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAYDIEIVNDAAHAGEANHGWCFGLPPGIRPEQWPLDP------------DTGYPLMHGFTLLLPEDYRVHGPEIVALSFFSLAPDQNDGGPTSVDGIREMLIDPPAQPPAEAELRPFWEA-----------GRNSHPRLHRM-----------------EDILGG--------------AYALILLDAAEFSGAPCQPRALPAGNP---LLAQTEPPQW----------LEAGSAASFVPDWAEDDYYLLRALGGRPAAGHQQRYPLRWTARAQDPNAGVV-PSEYGDGGYQLPHYWLDGKIERD-NYREHPWVEGHLPNHIGGT---MRPVQGVPEMSPFYVE--FEEYLGGYNFGG---GNAQLDFRDMRFDWACG------ |
| 2WZP Chain:R ((1-375)) | MLEANVYDNFNPNYYNISD----FSMPNGKKEKRGLPIPKARCQVINYELWETGYLYTSSATL----TVSVEVGDIVQILFPEVVPIEEALGKKKKLNLDMVYLVTDVDESNKATLKNYFWAMIESLDVPNAITKTTNFAIIDYLIDPNKNNLMSYGYFFNSSIFAGKATINRKAETSSAHDVAKRIFSKVQFQPTTTIQHAPSETDPRNLLFINFASRNWNRKRITTRVDIKQSVTMDTETIVERSAYNFAVVFVKNKATDDYTDPPKMYIAK---NNGDVIDYSTYHGDGTDLPDVRTAKTLFYDRDDHGNPPELSTIKVEISPSTIVTRLIFNQNELLPLYVNDLVDIWYEGKLYSGYIADRVKTEFNDRLIFVESGDKPNVI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WZP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15652 for 1903 contacts (-8.2/contact) +
2D Compatibility (PS) -30829 + (NN) -15467 + (LL) 588
1D Compatibility (HY) -10400 + (ID) 2550
Total energy: -74310.0 ( -39.05 by residue)
QMean score : 0.077
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