Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQPVAFVTGCSSGIGRALA-----DAFQRAGYRVWASARKE-------DDVRALA--EAGFQAVQLDVNDAAALARLAEELGVEAAGLDVLVNNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFP-LLRRKSGLVVNVGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVEVLEVQPGAIASNFGASASREMDSVVDERSPWWPLRRQIQARAAASQ------DNPTSAEDFARQLLAAVQRRPRPPLVRIGNGSRALPALARWLPRGLLERLLKKRFGLDTRL |
| 3KM0 Chain:B ((4-263)) | ----VVLITGCSSGIGLHLAVRLASDPSQ--SFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARER--VTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVH------------EVLD-RTDIHTFHRFYQYLAHSKQVFREAAQNP---EEVAEVFLTAL-RAPKPTL-RYFTTERFLPLL----------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3KM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -106920 for 1713 contacts (-62.4/contact) +
2D Compatibility (PS) -24690 + (NN) -14596 + (LL) 3300
1D Compatibility (HY) -20400 + (ID) 4650
Total energy: -167956.0 ( -98.05 by residue)
QMean score : 0.478
|
|
|