Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNGVSRLLSLALLGAALHWAPAQAEEQPRLFELLGQPGYKATWHAMFKGESDVPKWVSDASGPSSPSTSLSLEGQPYVLANSCKPHDCGNNRLLVAFRGDKSAAYGLQVSLPDEPAEVMQTPSKYATYRWYGEPSRQVRE---LLMKQLESD----PNWK
1XS0 Chain:A ((3-126))
--------------------------DLTISSLAKGETTKAAFNQMVQGH-KLPAWVMKG-GTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEKSNQMTGLFSTIDEKTS--------QEKLTWLNVNDALSIDGKTVLFAALTGSLENHPDGF
General information:
TITO was launched using:
RESULT:
Template:
1XS0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38982 for 854 contacts (-45.6/contact) +
2D Compatibility (PS) -13357 + (NN) -16143 + (LL) 2844
1D Compatibility (HY) -6400 + (ID) 1350
Total energy: -73388.0 ( -85.93 by residue)
QMean score : 0.375
(partial model without unconserved sides chains):
PDB file :
Tito_1XS0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XS0-query.scw
PDB file :
Tito_Scwrl_1XS0.pdb
: