Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MLLLVLAVQMSGCATV--RTLDAAKPGAPVVYAGTRLDWYSLHGGCCPM----ERFGAEAPA-HPG-LDLPGSALLDTLLLPFS-LATAIGLNLGVSGGM
1R5E Chain:A ((29-133))
DNVTSSQLLSVRHQLAESAGLPRDQHEFVSSQAPQSLRNRYNNLYSHTQRTLDMADMQHRYMTGASGINPGMLPHENVDDMRSAITDWSDMREALQHAMGIHADI
General information:
TITO was launched using:
RESULT:
Template:
1R5E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45131 for 530 contacts (-85.2/contact) +
2D Compatibility (PS) -9419 + (NN) -5493 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 850
Total energy: -62493.0 ( -117.91 by residue)
QMean score : 0.051
(partial model without unconserved sides chains):
PDB file :
Tito_1R5E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R5E-query.scw
PDB file :
Tito_Scwrl_1R5E.pdb
: