Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNRVRELRAERGWSQAELAGKLEVSRQTVNAIETGRYDPSLPLAFKLARVFGLAIEAIFDDREGQLD
2XJ3 Chain:B ((4-61))
--NNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNCPLEDIF--------
General information:
TITO was launched using:
RESULT:
Template:
2XJ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32863 for 380 contacts (-86.5/contact) +
2D Compatibility (PS) -6441 + (NN) -3861 + (LL) 408
1D Compatibility (HY) -7600 + (ID) 1400
Total energy: -51757.0 ( -136.20 by residue)
QMean score : 0.689
(partial model without unconserved sides chains):
PDB file :
Tito_2XJ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XJ3-query.scw
PDB file :
Tito_Scwrl_2XJ3.pdb
: