Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFRPRLLLTSLAIALGACSPQDPQAVTSAALAQQVILPTYSRWVEADQALASSALAYCQGK--E--DLAKARDAFHAAQKAWAELQPLLIGPLAEGNRAWQVQFWPDKKDLVGRQVEQLLKNNPQVDAAALAKASVVVQGLSAYEYILFDSKIDLADAATKARYCPLLEAIGTHQQQLAQDILARWKNDGGMLTQMSKFPNDRYADAHEAIAELLRVQVTALDML-KKKLGTPLGRQSKGIPQPYQAEAWRSNASLASLDASLSGAQALWEGIDGKGLKTLLPAEQK-DLAGKIDAAYADSHAKLAALEQKPLSELLASEDGRNQLNALYDSLNVVHRLHEGDLARALGVQLGFNANDGD |
| 3PF0 Chain:A ((78-383)) | -------------------------TYLTHVANDMVIPAYADAAKQSDLLHDLAQKHCQKAPVSGDELQALRDQWLVLAQAWASAEMVNFGPATASMSNLYINYYPDERGLVHGGVADLITANPALTAEQLANESAVVQGIPGLEEALYANDSL------DAGQCAYVMSASSALGTRLKDIEKNWQQN--AIK-LLAI--DKTAESDQGLNQWFNSLLSLVETMKSNAIEQPLGLSGK---AKGHLPAATAGQSRAIINAKLATLNKAMTDP---VLTAILGSNNENTVADTLSTALADTTALLAQMP-EDLATA-----DKATQQELYDHLTNITRLIKSQLIPTLGIRVGF------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PF0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 37762 for 2349 contacts (16.1/contact) +
2D Compatibility (PS) -31426 + (NN) -14301 + (LL) 2432
1D Compatibility (HY) 13200 + (ID) 1450
Total energy: 6217.0 ( 2.65 by residue)
QMean score : 0.312
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